STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_04371Methionine aminopeptidase 2-2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (451 aa)    
Predicted Functional Partners:
PTRG_00466
60S ribosomal protein L35.
  
 
 0.890
PTRG_09868
60S ribosomal protein L5-B.
  
 
 0.888
PTRG_00528
KOW domain-containing protein.
  
   0.877
PTRG_00062
40S ribosomal protein S3-2; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.872
PTRG_00987
60S ribosomal protein L25.
  
 
 0.857
PTRG_07837
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.840
PTRG_02399
60S ribosomal protein L7.
  
 
 0.804
PTRG_07298
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.804
PTRG_08206
60S ribosomal protein L7.
  
 
 0.804
PTRG_01609
50S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
  
 
 0.787
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.