Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CIA1 | PTRG_06031 | B2W377 | B2W893 | Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. | HIRA-interacting protein 5. | 0.544 |
| CIA1 | PTRG_06961 | B2W377 | B2WBE8 | Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. | Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.575 |
| PTRG_03023 | PTRG_04114 | B2W033 | B2W0X9 | Nudix hydrolase 1; Belongs to the Nudix hydrolase family. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.816 |
| PTRG_03023 | PTRG_06961 | B2W033 | B2WBE8 | Nudix hydrolase 1; Belongs to the Nudix hydrolase family. | Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.800 |
| PTRG_04114 | PTRG_03023 | B2W0X9 | B2W033 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Nudix hydrolase 1; Belongs to the Nudix hydrolase family. | 0.816 |
| PTRG_04114 | PTRG_06961 | B2W0X9 | B2WBE8 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.604 |
| PTRG_04237 | PTRG_05942 | B2W1A2 | B2W804 | Lipoate-protein ligase A. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.944 |
| PTRG_04237 | PTRG_06944 | B2W1A2 | B2WBD2 | Lipoate-protein ligase A. | Arabinofuranosidase/B-xylosidase. | 0.677 |
| PTRG_04237 | PTRG_06961 | B2W1A2 | B2WBE8 | Lipoate-protein ligase A. | Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.919 |
| PTRG_04237 | PTRG_07192 | B2W1A2 | B2WA79 | Lipoate-protein ligase A. | Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.804 |
| PTRG_04237 | PTRG_07339 | B2W1A2 | B2WAM6 | Lipoate-protein ligase A. | Uncharacterized protein. | 0.804 |
| PTRG_05942 | PTRG_04237 | B2W804 | B2W1A2 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Lipoate-protein ligase A. | 0.944 |
| PTRG_05942 | PTRG_06944 | B2W804 | B2WBD2 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Arabinofuranosidase/B-xylosidase. | 0.796 |
| PTRG_05942 | PTRG_06961 | B2W804 | B2WBE8 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.992 |
| PTRG_05942 | PTRG_07040 | B2W804 | B2WBM7 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Uncharacterized protein. | 0.933 |
| PTRG_05942 | PTRG_07192 | B2W804 | B2WA79 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.812 |
| PTRG_05942 | PTRG_07339 | B2W804 | B2WAM6 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Uncharacterized protein. | 0.812 |
| PTRG_06031 | CIA1 | B2W893 | B2W377 | HIRA-interacting protein 5. | Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. | 0.544 |
| PTRG_06031 | PTRG_06961 | B2W893 | B2WBE8 | HIRA-interacting protein 5. | Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.577 |
| PTRG_06944 | PTRG_04237 | B2WBD2 | B2W1A2 | Arabinofuranosidase/B-xylosidase. | Lipoate-protein ligase A. | 0.677 |
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