STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_11394tRNA (guanine(46)-N(7))-methyltransferase. (213 aa)    
Predicted Functional Partners:
PTRG_07631
tRNA (Guanine-N7-)-methyltransferase subunit Trm82.
   
 0.999
PTRG_09451
Uncharacterized protein.
  
 0.898
PTRG_05884
Uncharacterized protein.
    
 
 0.892
PTRG_09999
SGF29 C-terminal domain-containing protein.
    
 
 0.891
PTRG_00633
Eukaryotic translation initiation factor 3, gamma subunit.
   
 
 0.868
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 
 0.852
PTRG_08053
Nucleolar protein 12.
   
   0.843
PTRG_00993
Seryl-tRNA synthetase.
   
 
 0.840
PTRG_02011
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.836
PTRG_00926
Uncharacterized protein.
 
      0.825
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.