FNYG_00965 protein (Fusarium nygamai) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FNYG_00965

Uncharacterized protein. (309 aa)

Predicted Functional Partners:

FNYG_03700

0.785

FNYG_09149

0.771

FNYG_09720

0.760

FNYG_14323

0.752

FNYG_06797

0.752

FNYG_04764

0.731

FNYG_00536

0.731

FNYG_03603

0.683

FNYG_14355

0.675

FNYG_13171

0.671

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00536	FNYG_00965	A0A2K0WVK9	A0A2K0WUF2	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	Uncharacterized protein.	0.731
FNYG_00536	FNYG_03700	A0A2K0WVK9	A0A2K0WM74	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	Uncharacterized protein.	0.926
FNYG_00536	FNYG_06797	A0A2K0WVK9	A0A2K0WCT1	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	Hist_deacetyl domain-containing protein.	0.946
FNYG_00536	FNYG_09149	A0A2K0WVK9	A0A2K0W4S5	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	Uncharacterized protein.	0.816
FNYG_00536	FNYG_09720	A0A2K0WVK9	A0A2K0W3V6	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	WD_REPEATS_REGION domain-containing protein.	0.958
FNYG_00536	FNYG_13171	A0A2K0WVK9	A0A2K0VTT1	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	SWIB domain-containing protein.	0.621
FNYG_00536	FNYG_14323	A0A2K0WVK9	A0A2K0UT60	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.876
FNYG_00965	FNYG_00536	A0A2K0WUF2	A0A2K0WVK9	Uncharacterized protein.	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.731
FNYG_00965	FNYG_03603	A0A2K0WUF2	A0A2K0WLX2	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.683
FNYG_00965	FNYG_03700	A0A2K0WUF2	A0A2K0WM74	Uncharacterized protein.	Uncharacterized protein.	0.785
FNYG_00965	FNYG_04764	A0A2K0WUF2	A0A2K0WHI0	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.731
FNYG_00965	FNYG_06797	A0A2K0WUF2	A0A2K0WCT1	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.752
FNYG_00965	FNYG_09149	A0A2K0WUF2	A0A2K0W4S5	Uncharacterized protein.	Uncharacterized protein.	0.771
FNYG_00965	FNYG_09720	A0A2K0WUF2	A0A2K0W3V6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.760
FNYG_00965	FNYG_13171	A0A2K0WUF2	A0A2K0VTT1	Uncharacterized protein.	SWIB domain-containing protein.	0.671
FNYG_00965	FNYG_14323	A0A2K0WUF2	A0A2K0UT60	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.752
FNYG_00965	FNYG_14355	A0A2K0WUF2	A0A2K0UT34	Uncharacterized protein.	Uncharacterized protein.	0.675
FNYG_03603	FNYG_00965	A0A2K0WLX2	A0A2K0WUF2	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.683
FNYG_03603	FNYG_09149	A0A2K0WLX2	A0A2K0W4S5	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.989
FNYG_03603	FNYG_09720	A0A2K0WLX2	A0A2K0W3V6	Uncharacterized protein; Belongs to the actin family.	WD_REPEATS_REGION domain-containing protein.	0.581