STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74864.1Hypothetical protein; KEGG: twh:TWT315 0.00050 undecaprenyl-diphosphatase K06153; COG: COG2035 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. (279 aa)    
Predicted Functional Partners:
EDS74863.1
Hypothetical protein.
       0.556
EDS74627.1
K+-dependent Na+/Ca+ exchanger family protein; COG: COG0530 Ca2+/Na+ antiporter; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.534
EDS74071.1
O-antigen polymerase; KEGG: sdy:SDY_4054 2.7e-06 waaL; lipid A-core:surface polymer ligase WaaL K02847; COG: NOG36355 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.461
EDS75303.1
KEGG: ecj:JW3597 4.4e-06 rfaL; O-antigen ligase K02847; COG: NOG36406 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.457
EDS74862.1
ABC transporter, ATP-binding protein; KEGG: ssp:SSP0244 8.2e-14 ABC-type polar amino acid transport system ATPase component K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
       0.457
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
     0.435
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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