STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74107.1Receptor family ligand-binding protein; COG: COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (421 aa)    
Predicted Functional Partners:
EDS74109.1
KEGG: fal:FRAAL2623 3.7e-29 hypothetical protein; putative membrane protein involved in branched-chain amino acid transport, ATP-binding; COG: COG0559 Branched-chain amino acid ABC-type transport system, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.997
EDS74110.1
KEGG: reh:H16_A3653 3.3e-28 ABC-type transporter, ATPase and permease components; COG: COG4177 ABC-type branched-chain amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.997
EDS74111.1
ABC transporter, ATP-binding protein; KEGG: pen:PSEEN1283 1.2e-62 livG; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.996
EDS74112.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A5826 1.8e-70 ABC branched-chain amino acid family transporter, ATPase subunit K01996; COG: COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.994
EDS74664.1
ANTAR domain protein; KEGG: msy:MS53_0565 0.0050 truB; tRNA pseudouridine synthase B K03177; COG: COG3707 Response regulator with putative antiterminator output domain; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.931
EDS75358.1
KEGG: reh:H16_A1397 1.5e-64 ABC-type transporter, ATPase component; COG: COG1101 ABC-type uncharacterized transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
    
 0.633
EDS75346.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 4.5e-136 NADH dehydrogenase K00359; COG: COG0607 Rhodanese-related sulfurtransferase; Psort location: Cytoplasmic, score: 9.65; Belongs to the sulfur carrier protein TusA family.
  
 
 0.610
EDS74108.1
Hypothetical protein.
       0.572
EDS74090.1
Hypothetical protein; KEGG: ftl:FTL_0636 3.2e-09 NADH oxidase K00359; COG: COG0607 Rhodanese-related sulfurtransferase.
  
  
 0.522
EDS75817.1
Class II glutamine amidotransferase; KEGG: syn:sll1502 0. gltB; NADH-dependent glutamate synthase large subunit K00268; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score: 8.87.
     
 0.519
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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