STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_1594PFAM: Extracellular ligand-binding receptor; KEGG: dma:DMR_09050 ABC transporter substrate binding protein precursor. (394 aa)    
Predicted Functional Partners:
Adeg_1595
PFAM: inner-membrane translocator; KEGG: dma:DMR_09060 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
Adeg_1596
PFAM: inner-membrane translocator; KEGG: dma:DMR_09070 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
Adeg_1598
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfr:Sfri_1831 ABC transporter related.
 
 
 0.994
Adeg_1593
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo3442 ABC transporter ATP-binding protein.
 
 
 0.993
Adeg_1487
PFAM: inner-membrane translocator; KEGG: bbr:BB1505 ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.991
Adeg_1489
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_0838 ABC transporter related.
 
 
 0.981
Adeg_1488
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dat:HRM2_48730 LivG5.
 
 
 0.977
Adeg_1490
PFAM: Extracellular ligand-binding receptor; KEGG: dat:HRM2_48760 LivK2.
  
  
 
0.928
Adeg_1597
PFAM: AMP-dependent synthetase and ligase; KEGG: dal:Dalk_3803 AMP-dependent synthetase and ligase.
 
    0.870
Adeg_1592
KEGG: dma:DMR_16990 putative phenylacetate-coenzyme A ligase.
 
    0.842
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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