STRINGSTRING
Adeg_1609 protein (Ammonifex degensii) - STRING interaction network
"Adeg_1609" - Ribulose-1,5-biphosphate synthetase in Ammonifex degensii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_1609Ribulose-1,5-biphosphate synthetase; Involved in biosynthesis of the thiamine precursor thiazole (268 aa)    
Predicted Functional Partners:
Adeg_0421
Ribulose-1,5-biphosphate synthetase; Involved in biosynthesis of the thiamine precursor thiazole (271 aa)
   
   
 
0.804
Adeg_0494
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein (333 aa)
     
   
  0.714
Adeg_0354
NMT1/THI5 like domain-containing protein (316 aa)
     
   
  0.714
Adeg_1608
Hypothetical protein (120 aa)
              0.712
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction (434 aa)
   
   
  0.683
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) (344 aa)
   
   
  0.484
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii, A. degensii KC4, Ammonifex, Ammonifex degensii, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
Server load: low (8%) [HD]