STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl1Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)    
Predicted Functional Partners:
rpl35
60S ribosomal protein L35, L29 family.
  
 0.993
G0RJ56_HYPJQ
Ribosomal_L23eN domain-containing protein.
  
 0.993
G0RJV2_HYPJQ
Uncharacterized protein.
  
 0.993
rpl5
Ribosomal protein L5.
  
 0.993
rpl17
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.992
rpl30
Ribosomal protein L30.
   
 0.992
rpl32
Ribosomal protein L32.
   
 0.991
G0RSH4_HYPJQ
Ribosomal protein L24/26.
  
 0.991
rpl8
Ribosomal protein L8.
  
 0.991
rpl24
60S ribosomal protein L24.
   
 0.990
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.