STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0R7R0_HYPJQPredicted protein. (519 aa)    
Predicted Functional Partners:
G0R7A4_HYPJQ
Predicted protein.
 
      0.865
G0R8H7_HYPJQ
Translation elongation factor 3-like protein.
   
   0.623
rpl40
Ubiquitin fusion protein.
    
 0.585
G0RM45_HYPJQ
Predicted protein.
   
 0.573
ubi4
Polyubiquitin.
   
 0.573
G0RT55_HYPJQ
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
 0.493
G0RGT5_HYPJQ
Predicted protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.476
G0RM86_HYPJQ
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.440
G0RE41_HYPJQ
Predicted protein.
    
 0.420
G0RBR9_HYPJQ
Ubiquitin-activating enzyme; Belongs to the ubiquitin-activating E1 family.
    
 0.415
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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