STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RKZ5_HYPJQPredicted protein. (841 aa)    
Predicted Functional Partners:
G0RJC9_HYPJQ
Predicted protein.
   
 
 0.881
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.867
G0RIT8_HYPJQ
Predicted protein.
   
 
 0.847
G0RKZ2_HYPJQ
Predicted protein.
   
 
 0.814
G0R7K8_HYPJQ
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 
 0.811
G0RRY4_HYPJQ
Sas10 domain-containing protein.
   
  0.758
G0RNQ2_HYPJQ
Predicted protein.
  
0.754
G0RGT0_HYPJQ
Uncharacterized protein.
   
 0.750
G0RFA9_HYPJQ
Predicted protein.
  
 
0.742
G0RNT5_HYPJQ
Uncharacterized protein.
   
 0.737
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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