G0RM01_HYPJQ protein (Trichoderma reesei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G0RM01_HYPJQ

Predicted protein. (535 aa)

Predicted Functional Partners:

G0RV76_HYPJQ

0.948

G0RJT0_HYPJQ

0.929

G0RRY8_HYPJQ

0.926

G0RGA9_HYPJQ

0.913

G0RSS2_HYPJQ

0.911

G0RU80_HYPJQ

0.907

G0RXI8_HYPJQ

0.900

G0RM02_HYPJQ

0.870

G0RLN0_HYPJQ

0.507

G0RMT9_HYPJQ

0.507

Your Current Organism:

Trichoderma reesei

NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G0RGA9_HYPJQ	G0RJT0_HYPJQ	G0RGA9	G0RJT0	Predicted protein.	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	0.941
G0RGA9_HYPJQ	G0RLN0_HYPJQ	G0RGA9	G0RLN0	Predicted protein.	Predicted protein.	0.575
G0RGA9_HYPJQ	G0RM01_HYPJQ	G0RGA9	G0RM01	Predicted protein.	Predicted protein.	0.913
G0RGA9_HYPJQ	G0RMT9_HYPJQ	G0RGA9	G0RMT9	Predicted protein.	Predicted protein.	0.515
G0RGA9_HYPJQ	G0RRY8_HYPJQ	G0RGA9	G0RRY8	Predicted protein.	Predicted protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.975
G0RGA9_HYPJQ	G0RSS2_HYPJQ	G0RGA9	G0RSS2	Predicted protein.	Predicted protein.	0.948
G0RGA9_HYPJQ	G0RU80_HYPJQ	G0RGA9	G0RU80	Predicted protein.	Histone H3 methyltransferase.	0.913
G0RGA9_HYPJQ	G0RV76_HYPJQ	G0RGA9	G0RV76	Predicted protein.	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	0.931
G0RGA9_HYPJQ	G0RXI8_HYPJQ	G0RGA9	G0RXI8	Predicted protein.	Predicted protein.	0.913
G0RJT0_HYPJQ	G0RGA9_HYPJQ	G0RJT0	G0RGA9	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	Predicted protein.	0.941
G0RJT0_HYPJQ	G0RLN0_HYPJQ	G0RJT0	G0RLN0	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	Predicted protein.	0.557
G0RJT0_HYPJQ	G0RM01_HYPJQ	G0RJT0	G0RM01	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	Predicted protein.	0.929
G0RJT0_HYPJQ	G0RRY8_HYPJQ	G0RJT0	G0RRY8	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	Predicted protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.969
G0RJT0_HYPJQ	G0RSS2_HYPJQ	G0RJT0	G0RSS2	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	Predicted protein.	0.946
G0RJT0_HYPJQ	G0RU80_HYPJQ	G0RJT0	G0RU80	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	Histone H3 methyltransferase.	0.921
G0RJT0_HYPJQ	G0RV76_HYPJQ	G0RJT0	G0RV76	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	0.973
G0RJT0_HYPJQ	G0RXI8_HYPJQ	G0RJT0	G0RXI8	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	Predicted protein.	0.929
G0RLN0_HYPJQ	G0RGA9_HYPJQ	G0RLN0	G0RGA9	Predicted protein.	Predicted protein.	0.575
G0RLN0_HYPJQ	G0RJT0_HYPJQ	G0RLN0	G0RJT0	Predicted protein.	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	0.557
G0RLN0_HYPJQ	G0RM01_HYPJQ	G0RLN0	G0RM01	Predicted protein.	Predicted protein.	0.507