STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RPI1_HYPJQRNA helicase. (815 aa)    
Predicted Functional Partners:
G0RTQ6_HYPJQ
NUC153 domain-containing protein.
   
 0.997
G0RNT5_HYPJQ
Uncharacterized protein.
   
 0.996
G0RGU4_HYPJQ
RNA helicase.
  
  
0.990
G0RAW2_HYPJQ
RRM domain-containing protein.
   
 
 0.985
G0RRY4_HYPJQ
Sas10 domain-containing protein.
   
 0.981
G0RHU0_HYPJQ
Predicted protein.
   
 
 0.980
G0RF58_HYPJQ
Uncharacterized protein.
   
 0.977
G0RHX7_HYPJQ
U3 small nucleolar RNA-associated protein 22.
   
 0.976
G0RV21_HYPJQ
Uncharacterized protein.
   
 0.975
ckb1
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
  0.964
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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