K3W860_GLOUD protein (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K3W860_GLOUD

Uncharacterized protein. (1062 aa)

Predicted Functional Partners:

K3W7V5_GLOUD

0.777

K3WBQ4_GLOUD

0.774

K3WUC4_GLOUD

0.769

K3WS78_GLOUD

0.767

K3WD14_GLOUD

0.753

K3WEG5_GLOUD

0.742

K3X7L8_GLOUD

0.737

K3WQF5_GLOUD

0.734

K3X7N1_GLOUD

0.733

K3WDN7_GLOUD

0.731

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W7V5_GLOUD	K3W860_GLOUD	K3W7V5	K3W860	RPOLD domain-containing protein.	Uncharacterized protein.	0.777
K3W7V5_GLOUD	K3WBQ4_GLOUD	K3W7V5	K3WBQ4	RPOLD domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.501
K3W7V5_GLOUD	K3WD14_GLOUD	K3W7V5	K3WD14	RPOLD domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.432
K3W7V5_GLOUD	K3WQF5_GLOUD	K3W7V5	K3WQF5	RPOLD domain-containing protein.	RPOL4c domain-containing protein.	0.998
K3W7V5_GLOUD	K3WS78_GLOUD	K3W7V5	K3WS78	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
K3W7V5_GLOUD	K3WUC4_GLOUD	K3W7V5	K3WUC4	RPOLD domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.896
K3W7V5_GLOUD	K3X7N1_GLOUD	K3W7V5	K3X7N1	RPOLD domain-containing protein.	RPOLD domain-containing protein.	0.776
K3W860_GLOUD	K3W7V5_GLOUD	K3W860	K3W7V5	Uncharacterized protein.	RPOLD domain-containing protein.	0.777
K3W860_GLOUD	K3WBQ4_GLOUD	K3W860	K3WBQ4	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.774
K3W860_GLOUD	K3WD14_GLOUD	K3W860	K3WD14	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.753
K3W860_GLOUD	K3WDN7_GLOUD	K3W860	K3WDN7	Uncharacterized protein.	Uncharacterized protein.	0.731
K3W860_GLOUD	K3WEG5_GLOUD	K3W860	K3WEG5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.742
K3W860_GLOUD	K3WQF5_GLOUD	K3W860	K3WQF5	Uncharacterized protein.	RPOL4c domain-containing protein.	0.734
K3W860_GLOUD	K3WS78_GLOUD	K3W860	K3WS78	Uncharacterized protein.	Uncharacterized protein.	0.767
K3W860_GLOUD	K3WUC4_GLOUD	K3W860	K3WUC4	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.769
K3W860_GLOUD	K3X7L8_GLOUD	K3W860	K3X7L8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.737
K3W860_GLOUD	K3X7N1_GLOUD	K3W860	K3X7N1	Uncharacterized protein.	RPOLD domain-containing protein.	0.733
K3WBQ4_GLOUD	K3W7V5_GLOUD	K3WBQ4	K3W7V5	RuvB-like helicase; Belongs to the RuvB family.	RPOLD domain-containing protein.	0.501
K3WBQ4_GLOUD	K3W860_GLOUD	K3WBQ4	K3W860	RuvB-like helicase; Belongs to the RuvB family.	Uncharacterized protein.	0.774
K3WBQ4_GLOUD	K3WEG5_GLOUD	K3WBQ4	K3WEG5	RuvB-like helicase; Belongs to the RuvB family.	WD_REPEATS_REGION domain-containing protein.	0.809