STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K3XB04_GLOUDPH domain-containing protein. (531 aa)    
Predicted Functional Partners:
K3WII9_GLOUD
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...]
    
 
 0.829
K3X675_GLOUD
VWFA domain-containing protein.
    
 0.712
K3WYY1_GLOUD
Ku domain-containing protein.
     
 0.704
K3W7P1_GLOUD
WLM domain-containing protein.
    
 
 0.691
K3WDN7_GLOUD
Uncharacterized protein.
   
 
 0.684
K3WNE6_GLOUD
ERCC4 domain-containing protein.
   
 
 0.661
K3WYP1_GLOUD
ERCC4 domain-containing protein.
   
 
 0.642
K3WRE2_GLOUD
DNA ligase.
   
 
 0.577
K3WYA7_GLOUD
DNA ligase.
   
 
 0.577
K3WBD5_GLOUD
DNA ligase.
   
 
 0.565
Your Current Organism:
Globisporangium ultimum
NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144
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