STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGBL1Integrin subunit beta like 1. (494 aa)    
Predicted Functional Partners:
FREM1
FRAS1 related extracellular matrix 1.
    
  0.842
FREM3
FRAS1 related extracellular matrix 3.
    
  0.842
TNC
Tenascin C.
   
0.841
TNR
Tenascin R.
   
 0.841
TNN
Tenascin N.
    
 0.836
FRAS1
Fraser extracellular matrix complex subunit 1.
    
 0.832
TNS3
Tensin 3.
    
 0.820
TNS2
Tensin 2.
    
 0.820
TNS1
Tensin 1.
    
 0.820
EGFLAM
EGF like, fibronectin type III and laminin G domains.
     
 0.799
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.