Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPSF2 | MKRN3 | ENSSTOP00000008548 | ENSSTOP00000005440 | Cleavage and polyadenylation specificity factor subunit 2. | Makorin ring finger protein 3. | 0.637 |
ENSSTOP00000031366 | MKRN3 | ENSSTOP00000031366 | ENSSTOP00000005440 | Ubiquitin-like domain-containing protein. | Makorin ring finger protein 3. | 0.534 |
ENSSTOP00000031366 | PTEN | ENSSTOP00000031366 | ENSSTOP00000015636 | Ubiquitin-like domain-containing protein. | Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. | 0.687 |
ENSSTOP00000031366 | TRIP12 | ENSSTOP00000031366 | ENSSTOP00000024104 | Ubiquitin-like domain-containing protein. | Thyroid hormone receptor interactor 12. | 0.914 |
ENSSTOP00000031366 | UBA3 | ENSSTOP00000031366 | ENSSTOP00000002872 | Ubiquitin-like domain-containing protein. | Ubiquitin like modifier activating enzyme 3. | 0.777 |
FECH | MKRN3 | ENSSTOP00000001910 | ENSSTOP00000005440 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | Makorin ring finger protein 3. | 0.572 |
FECH | SRI | ENSSTOP00000001910 | ENSSTOP00000029915 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | Sorcin. | 0.771 |
HAGH | MKRN3 | ENSSTOP00000008167 | ENSSTOP00000005440 | Hydroxyacylglutathione hydrolase. | Makorin ring finger protein 3. | 0.537 |
HAGH | UBA3 | ENSSTOP00000008167 | ENSSTOP00000002872 | Hydroxyacylglutathione hydrolase. | Ubiquitin like modifier activating enzyme 3. | 0.430 |
LOC101966763 | MKRN3 | ENSSTOP00000019666 | ENSSTOP00000005440 | Ubiquitin-like domain-containing protein. | Makorin ring finger protein 3. | 0.534 |
LOC101966763 | PTEN | ENSSTOP00000019666 | ENSSTOP00000015636 | Ubiquitin-like domain-containing protein. | Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. | 0.687 |
LOC101966763 | TRIP12 | ENSSTOP00000019666 | ENSSTOP00000024104 | Ubiquitin-like domain-containing protein. | Thyroid hormone receptor interactor 12. | 0.914 |
LOC101966763 | UBA3 | ENSSTOP00000019666 | ENSSTOP00000002872 | Ubiquitin-like domain-containing protein. | Ubiquitin like modifier activating enzyme 3. | 0.777 |
MKRN3 | CPSF2 | ENSSTOP00000005440 | ENSSTOP00000008548 | Makorin ring finger protein 3. | Cleavage and polyadenylation specificity factor subunit 2. | 0.637 |
MKRN3 | ENSSTOP00000031366 | ENSSTOP00000005440 | ENSSTOP00000031366 | Makorin ring finger protein 3. | Ubiquitin-like domain-containing protein. | 0.534 |
MKRN3 | FECH | ENSSTOP00000005440 | ENSSTOP00000001910 | Makorin ring finger protein 3. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.572 |
MKRN3 | HAGH | ENSSTOP00000005440 | ENSSTOP00000008167 | Makorin ring finger protein 3. | Hydroxyacylglutathione hydrolase. | 0.537 |
MKRN3 | LOC101966763 | ENSSTOP00000005440 | ENSSTOP00000019666 | Makorin ring finger protein 3. | Ubiquitin-like domain-containing protein. | 0.534 |
MKRN3 | PTEN | ENSSTOP00000005440 | ENSSTOP00000015636 | Makorin ring finger protein 3. | Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. | 0.567 |
MKRN3 | Rps27a | ENSSTOP00000005440 | ENSSTOP00000008580 | Makorin ring finger protein 3. | Ubiquitin-like domain-containing protein. | 0.534 |
page 1 of 3