STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB13Ankyrin repeat and SOCS box containing 13. (278 aa)    
Predicted Functional Partners:
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.851
ASB7
Ankyrin repeat and SOCS box containing 7.
  
 
0.804
I3N248_ICTTR
Uncharacterized protein.
    
 0.801
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.754
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.753
COMMD1
Copper metabolism domain containing 1.
    
  0.745
COMMD4
COMM domain containing 4.
    
 0.729
COMMD9
COMM domain containing 9.
    
  0.711
COMMD5
COMM domain containing 5.
    
  0.702
Commd7
COMM domain-containing protein.
    
  0.689
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.