STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGLAFolliculogenesis specific bHLH transcription factor. (195 aa)    
Predicted Functional Partners:
Nobox
Homeobox domain-containing protein.
   
 0.780
LHX8
LIM homeobox 8.
   
 0.768
LOC101967701
TGF_BETA_2 domain-containing protein.
   
  
 0.634
GATA5
GATA binding protein 5.
   
 0.630
GATA6
GATA binding protein 6.
   
 0.630
LDB2
LIM domain binding 2.
    
 0.630
Gata4
GATA-type domain-containing protein.
   
 0.630
LDB1
LIM domain binding 1.
    
 0.630
LHX6
LIM homeobox 6.
   
 0.625
TCF3
Transcription factor 3.
    
 0.620
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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