STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKAB1Protein kinase AMP-activated non-catalytic subunit beta 1. (270 aa)    
Predicted Functional Partners:
PRKAA2
Non-specific serine/threonine protein kinase.
    
 0.997
PRKAG1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
   
 0.997
PRKAA1
Non-specific serine/threonine protein kinase.
    
 0.997
PRKAG2
Protein kinase AMP-activated non-catalytic subunit gamma 2.
   
 0.995
PRKAG3
Protein kinase AMP-activated non-catalytic subunit gamma 3.
   
 0.991
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
  
 
0.987
KMT2D
Lysine methyltransferase 2D.
    
  0.984
KMT2C
Lysine methyltransferase 2C.
    
  0.980
STK11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.954
CAMKK2
Calcium/calmodulin dependent protein kinase kinase 2.
    
 0.927
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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