STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESRRGEstrogen related receptor gamma. (458 aa)    
Predicted Functional Partners:
NCOR2
Nuclear receptor corepressor 2.
    
 0.957
NCOA1
Nuclear receptor coactivator.
    
 0.944
NRIP1
Nuclear receptor interacting protein 1.
    
 0.943
PPARGC1A
PPARG coactivator 1 alpha.
   
 0.936
ESRRA
Estrogen related receptor alpha.
  
 
 
0.841
PPARGC1B
PPARG coactivator 1 beta.
    
 0.834
NCOR1
Nuclear receptor corepressor 1.
    
 0.799
TADA1
Transcriptional adaptor 1.
    
 0.691
MED1
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.688
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 
0.680
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.