STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN3Contactin 3. (1028 aa)    
Predicted Functional Partners:
Ptprg
Uncharacterized protein.
    
 
 0.944
APP
Amyloid beta precursor protein.
   
 
 0.886
NFASC
Neurofascin.
   
0.772
L1CAM
L1 cell adhesion molecule.
    
0.772
CHL1
Cell adhesion molecule L1 like.
    
0.769
NRCAM
Neuronal cell adhesion molecule.
    
0.769
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.672
Cntnap4
Uncharacterized protein.
   
 0.636
Gypc
4.1m domain-containing protein.
   
 0.636
CNTNAP1
Contactin associated protein 1.
   
 0.636
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.