STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRTAC1Cartilage acidic protein 1. (646 aa)    
Predicted Functional Partners:
MAPRE2
Microtubule associated protein RP/EB family member 2.
    
   0.697
MAPRE3
Microtubule associated protein RP/EB family member 3.
    
   0.563
BRINP2
BMP/retinoic acid inducible neural specific 2.
   
  
 0.555
LRFN1
Leucine rich repeat and fibronectin type III domain containing 1.
      
 0.468
GPLD1
Glycosylphosphatidylinositol specific phospholipase D1.
      
 0.465
I3MH86_ICTTR
Uncharacterized protein.
      
 0.414
CLDN19
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.408
LRFN3
Leucine rich repeat and fibronectin type III domain containing 3.
      
 0.407
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.