STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCG4ATP binding cassette subfamily G member 4. (646 aa)    
Predicted Functional Partners:
ABCG5
ATP binding cassette subfamily G member 5.
   
0.864
APOA1
Apolipoprotein A1.
   
 0.695
ABCC5
ATP binding cassette subfamily C member 5.
   
 0.690
APOA4
Apolipoprotein A4.
   
 0.627
ABCC4
ATP binding cassette subfamily C member 4.
   
 0.616
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.609
Atp5f1c
Uncharacterized protein.
   
   0.578
ENSSTOP00000031404
Uncharacterized protein.
   
   0.578
GIT1
GIT ArfGAP 1.
      
 0.572
ATP5F1D
ATP synthase F1 subunit delta.
  
   0.570
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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