GSX2 protein (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GSX2

GS homeobox 2. (218 aa)

Predicted Functional Partners:

BCL11A

0.544

Yy1

0.509

PBX2

0.499

PBX4

0.499

PBX1

0.499

PBX3

0.499

FOXG1

0.487

HES6

0.458

TBR1

0.456

VRK2

0.450

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCL11A	GSX2	ENSSTOP00000030516	ENSSTOP00000016988	BAF chromatin remodeling complex subunit BCL11A.	GS homeobox 2.	0.544
BCL11A	VRK2	ENSSTOP00000030516	ENSSTOP00000011225	BAF chromatin remodeling complex subunit BCL11A.	VRK serine/threonine kinase 2.	0.620
BCL11A	Yy1	ENSSTOP00000030516	ENSSTOP00000024978	BAF chromatin remodeling complex subunit BCL11A.	Uncharacterized protein.	0.518
FOXG1	GSX2	ENSSTOP00000018836	ENSSTOP00000016988	Forkhead box G1.	GS homeobox 2.	0.487
FOXG1	TBR1	ENSSTOP00000018836	ENSSTOP00000021694	Forkhead box G1.	T-box brain transcription factor 1.	0.623
GSX2	BCL11A	ENSSTOP00000016988	ENSSTOP00000030516	GS homeobox 2.	BAF chromatin remodeling complex subunit BCL11A.	0.544
GSX2	FOXG1	ENSSTOP00000016988	ENSSTOP00000018836	GS homeobox 2.	Forkhead box G1.	0.487
GSX2	HES6	ENSSTOP00000016988	ENSSTOP00000021873	GS homeobox 2.	Hes family bHLH transcription factor 6.	0.458
GSX2	PBX1	ENSSTOP00000016988	ENSSTOP00000026249	GS homeobox 2.	PBX homeobox 1.	0.499
GSX2	PBX2	ENSSTOP00000016988	ENSSTOP00000013213	GS homeobox 2.	PBX homeobox 2.	0.499
GSX2	PBX3	ENSSTOP00000016988	ENSSTOP00000028643	GS homeobox 2.	PBX homeobox 3.	0.499
GSX2	PBX4	ENSSTOP00000016988	ENSSTOP00000021597	GS homeobox 2.	PBX homeobox 4.	0.499
GSX2	TBR1	ENSSTOP00000016988	ENSSTOP00000021694	GS homeobox 2.	T-box brain transcription factor 1.	0.456
GSX2	VRK2	ENSSTOP00000016988	ENSSTOP00000011225	GS homeobox 2.	VRK serine/threonine kinase 2.	0.450
GSX2	Yy1	ENSSTOP00000016988	ENSSTOP00000024978	GS homeobox 2.	Uncharacterized protein.	0.509
HES6	GSX2	ENSSTOP00000021873	ENSSTOP00000016988	Hes family bHLH transcription factor 6.	GS homeobox 2.	0.458
PBX1	GSX2	ENSSTOP00000026249	ENSSTOP00000016988	PBX homeobox 1.	GS homeobox 2.	0.499
PBX1	PBX2	ENSSTOP00000026249	ENSSTOP00000013213	PBX homeobox 1.	PBX homeobox 2.	0.434
PBX2	GSX2	ENSSTOP00000013213	ENSSTOP00000016988	PBX homeobox 2.	GS homeobox 2.	0.499
PBX2	PBX1	ENSSTOP00000013213	ENSSTOP00000026249	PBX homeobox 2.	PBX homeobox 1.	0.434