LOC101959838 protein (Ictidomys tridecemlineatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

LOC101959838

Uncharacterized protein. (86 aa)

Predicted Functional Partners:

MRPS15

0.985

MRPS25

0.984

DAP3

0.983

MRPS31

0.982

MRPS28

0.982

MRPS6

0.981

MRPS12

0.980

MRPS11

0.980

MRPS16

0.980

MRPS27

0.979

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAP3	LOC101959838	ENSSTOP00000004157	ENSSTOP00000018434	Death associated protein 3.	Uncharacterized protein.	0.983
DAP3	MRPS11	ENSSTOP00000004157	ENSSTOP00000019800	Death associated protein 3.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.999
DAP3	MRPS12	ENSSTOP00000004157	ENSSTOP00000008060	Death associated protein 3.	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
DAP3	MRPS15	ENSSTOP00000004157	ENSSTOP00000000554	Death associated protein 3.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
DAP3	MRPS16	ENSSTOP00000004157	ENSSTOP00000020039	Death associated protein 3.	Mitochondrial ribosomal protein S16.	0.999
DAP3	MRPS25	ENSSTOP00000004157	ENSSTOP00000025550	Death associated protein 3.	Mitochondrial ribosomal protein S25.	0.999
DAP3	MRPS27	ENSSTOP00000004157	ENSSTOP00000005875	Death associated protein 3.	Mitochondrial ribosomal protein S27.	0.999
DAP3	MRPS28	ENSSTOP00000004157	ENSSTOP00000030721	Death associated protein 3.	Mitochondrial ribosomal protein S28.	0.998
DAP3	MRPS31	ENSSTOP00000004157	ENSSTOP00000000881	Death associated protein 3.	Mitochondrial ribosomal protein S31.	0.998
DAP3	MRPS6	ENSSTOP00000004157	ENSSTOP00000021088	Death associated protein 3.	Mitochondrial ribosomal protein S6.	0.999
LOC101959838	DAP3	ENSSTOP00000018434	ENSSTOP00000004157	Uncharacterized protein.	Death associated protein 3.	0.983
LOC101959838	MRPS11	ENSSTOP00000018434	ENSSTOP00000019800	Uncharacterized protein.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.980
LOC101959838	MRPS12	ENSSTOP00000018434	ENSSTOP00000008060	Uncharacterized protein.	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.980
LOC101959838	MRPS15	ENSSTOP00000018434	ENSSTOP00000000554	Uncharacterized protein.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.985
LOC101959838	MRPS16	ENSSTOP00000018434	ENSSTOP00000020039	Uncharacterized protein.	Mitochondrial ribosomal protein S16.	0.980
LOC101959838	MRPS25	ENSSTOP00000018434	ENSSTOP00000025550	Uncharacterized protein.	Mitochondrial ribosomal protein S25.	0.984
LOC101959838	MRPS27	ENSSTOP00000018434	ENSSTOP00000005875	Uncharacterized protein.	Mitochondrial ribosomal protein S27.	0.979
LOC101959838	MRPS28	ENSSTOP00000018434	ENSSTOP00000030721	Uncharacterized protein.	Mitochondrial ribosomal protein S28.	0.982
LOC101959838	MRPS31	ENSSTOP00000018434	ENSSTOP00000000881	Uncharacterized protein.	Mitochondrial ribosomal protein S31.	0.982
LOC101959838	MRPS6	ENSSTOP00000018434	ENSSTOP00000021088	Uncharacterized protein.	Mitochondrial ribosomal protein S6.	0.981