STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BATFBasic leucine zipper ATF-like transcription factor. (125 aa)    
Predicted Functional Partners:
JUNB
JunB proto-oncogene, AP-1 transcription factor subunit.
   
 0.980
JUN
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.903
BATF3
Basic leucine zipper ATF-like transcription factor 3.
   
 
0.876
BATF2
Basic leucine zipper ATF-like transcription factor 2.
   
 
0.852
SPC25
SPC25 component of NDC80 kinetochore complex.
    
 0.762
NUF2
NUF2 component of NDC80 kinetochore complex.
    
 0.750
NDC80
NDC80 kinetochore complex component.
    
 0.734
BCL11B
BAF chromatin remodeling complex subunit BCL11B.
    
 
 0.733
IRF4
Interferon regulatory factor 4.
   
 
 0.705
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.680
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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