STRINGSTRING
TAPT1 protein (Ictidomys tridecemlineatus) - STRING interaction network
"TAPT1" - Transmembrane anterior posterior transformation 1 in Ictidomys tridecemlineatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAPT1Transmembrane anterior posterior transformation 1 (456 aa)    
Predicted Functional Partners:
MRPL1
Mitochondrial ribosomal protein L1 (326 aa)
     
   
  0.742
SLC25A35
Solute carrier family 25, member 35; Belongs to the mitochondrial carrier (TC 2.A.29) family (300 aa)
           
  0.741
SLC25A25
Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25; Belongs to the mitochondrial carrier (TC 2.A.29) family (514 aa)
     
   
  0.739
NSUN7
NOP2/Sun domain family, member 7; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (725 aa)
     
   
  0.684
SUCO
SUN domain containing ossification factor (1257 aa)
     
      0.679
NOP14
NOP14 nucleolar protein (860 aa)
     
   
  0.653
TPRKB
TP53RK binding protein; Belongs to the CGI121/TPRKB family (175 aa)
           
  0.650
GBA3
Glucosidase, beta, acid 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family (90 aa)
           
  0.635
PAXIP1
Uncharacterized protein; PAX interacting (with transcription-activation domain) protein 1 (982 aa)
     
   
  0.623
SNX25
Sorting nexin 25 (843 aa)
     
   
  0.612
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Ictidomys tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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