STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP25Matrix metallopeptidase 25. (553 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.855
HBEGF
Heparin binding EGF like growth factor.
    
 0.853
GNAI2
G protein subunit alpha i2.
     
 0.836
GNAI3
G protein subunit alpha i3.
     
 0.834
GNAI1
G protein subunit alpha i1.
     
 0.828
MMP14
Matrix metallopeptidase 14.
  
  
0.800
MMP24
Matrix metallopeptidase 24.
  
  
 
0.788
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.781
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.735
MMP13
Matrix metallopeptidase 13.
  
 
0.643
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.