STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF3Polycomb group ring finger 3. (241 aa)    
Predicted Functional Partners:
RYBP
RING1 and YY1 binding protein.
    
 0.972
RING1
Ring finger protein 1.
    
 0.949
YAF2
YY1 associated factor 2.
    
 0.936
ENSSTOP00000031279
Uncharacterized protein.
    
 0.929
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
    
 0.927
Rnf2
RING-type domain-containing protein.
    
0.924
ENSSTOP00000028844
Uncharacterized protein.
    
 0.924
PCGF1
Polycomb group ring finger 1.
    
0.909
KDM2B
Lysine demethylase 2B.
   
 0.892
FBRS
Fibrosin.
    
 0.872
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.