STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANGPTL6Angiopoietin like 6. (467 aa)    
Predicted Functional Partners:
ANGPTL8
Angiopoietin like 8.
    
 0.762
MST1R
Macrophage stimulating 1 receptor.
   
 
 0.737
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 
 0.737
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.591
TMEM116
Transmembrane protein 116.
      
 0.576
MCRS1
Microspherule protein 1.
    
 0.565
TIE1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
    
 0.553
GLG1
Golgi glycoprotein 1.
      
 0.534
TEX30
Testis expressed 30.
    
 0.530
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.530
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.