Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACSL4 | ASCL4 | ENSSTOP00000004738 | ENSSTOP00000023737 | Acyl-CoA synthetase long chain family member 4. | Achaete-scute family bHLH transcription factor 4. | 0.565 |
ACSL4 | RUNX1 | ENSSTOP00000004738 | ENSSTOP00000017745 | Acyl-CoA synthetase long chain family member 4. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.455 |
ACSL4 | RUNX2 | ENSSTOP00000004738 | ENSSTOP00000029414 | Acyl-CoA synthetase long chain family member 4. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.455 |
ACSL4 | RUNX3 | ENSSTOP00000004738 | ENSSTOP00000024287 | Acyl-CoA synthetase long chain family member 4. | RUNX family transcription factor 3. | 0.455 |
ASCL4 | ACSL4 | ENSSTOP00000023737 | ENSSTOP00000004738 | Achaete-scute family bHLH transcription factor 4. | Acyl-CoA synthetase long chain family member 4. | 0.565 |
ASCL4 | LDB1 | ENSSTOP00000023737 | ENSSTOP00000030613 | Achaete-scute family bHLH transcription factor 4. | LIM domain binding 1. | 0.630 |
ASCL4 | LDB2 | ENSSTOP00000023737 | ENSSTOP00000023362 | Achaete-scute family bHLH transcription factor 4. | LIM domain binding 2. | 0.630 |
ASCL4 | LOC101974830 | ENSSTOP00000023737 | ENSSTOP00000031751 | Achaete-scute family bHLH transcription factor 4. | BHLH domain-containing protein. | 0.663 |
ASCL4 | RUNX1 | ENSSTOP00000023737 | ENSSTOP00000017745 | Achaete-scute family bHLH transcription factor 4. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.471 |
ASCL4 | RUNX2 | ENSSTOP00000023737 | ENSSTOP00000029414 | Achaete-scute family bHLH transcription factor 4. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.471 |
ASCL4 | RUNX3 | ENSSTOP00000023737 | ENSSTOP00000024287 | Achaete-scute family bHLH transcription factor 4. | RUNX family transcription factor 3. | 0.471 |
ASCL4 | TCF3 | ENSSTOP00000023737 | ENSSTOP00000009240 | Achaete-scute family bHLH transcription factor 4. | Transcription factor 3. | 0.638 |
ASCL4 | TCF4 | ENSSTOP00000023737 | ENSSTOP00000027476 | Achaete-scute family bHLH transcription factor 4. | Transcription factor 4. | 0.663 |
ASCL4 | Tcf12 | ENSSTOP00000023737 | ENSSTOP00000027706 | Achaete-scute family bHLH transcription factor 4. | BHLH domain-containing protein. | 0.663 |
LDB1 | ASCL4 | ENSSTOP00000030613 | ENSSTOP00000023737 | LIM domain binding 1. | Achaete-scute family bHLH transcription factor 4. | 0.630 |
LDB1 | LOC101974830 | ENSSTOP00000030613 | ENSSTOP00000031751 | LIM domain binding 1. | BHLH domain-containing protein. | 0.809 |
LDB1 | RUNX1 | ENSSTOP00000030613 | ENSSTOP00000017745 | LIM domain binding 1. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.652 |
LDB1 | RUNX2 | ENSSTOP00000030613 | ENSSTOP00000029414 | LIM domain binding 1. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.652 |
LDB1 | RUNX3 | ENSSTOP00000030613 | ENSSTOP00000024287 | LIM domain binding 1. | RUNX family transcription factor 3. | 0.652 |
LDB1 | TCF3 | ENSSTOP00000030613 | ENSSTOP00000009240 | LIM domain binding 1. | Transcription factor 3. | 0.878 |
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