STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSTDystonin. (7747 aa)    
Predicted Functional Partners:
ITGB4
Integrin beta.
   
 0.915
I3M8D7_ICTTR
Calponin-homology (CH) domain-containing protein.
    
 
 0.791
LOC101968951
Uncharacterized protein.
    
 
 0.791
JUP
Junction plakoglobin.
   
 0.789
COL17A1
Collagen type XVII alpha 1 chain.
    
 0.748
CTNNB1
Catenin beta 1.
    
 0.739
PLEC
Plectin.
     
0.726
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
0.725
ITSN2
Intersectin 2.
    
 0.695
DSC2
Desmocollin 2; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.688
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.