Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKL_0795 | CKL_0797 | CKL_0795 | CKL_0797 | Conserved hypothetical protein. | Predicted Copper-binding protein. | 0.859 |
CKL_0795 | actP | CKL_0795 | CKL_0796 | Conserved hypothetical protein. | ActP; Predicted copper-transporting ATPase. | 0.899 |
CKL_0795 | pacS | CKL_0795 | CKL_2240 | Conserved hypothetical protein. | PacS; Predicted cation-transporting ATPase. | 0.559 |
CKL_0797 | CKL_0795 | CKL_0797 | CKL_0795 | Predicted Copper-binding protein. | Conserved hypothetical protein. | 0.859 |
CKL_0797 | CKL_2138 | CKL_0797 | CKL_2138 | Predicted Copper-binding protein. | Pyruvate-flavodoxin oxidoreductase. | 0.403 |
CKL_0797 | actP | CKL_0797 | CKL_0796 | Predicted Copper-binding protein. | ActP; Predicted copper-transporting ATPase. | 0.937 |
CKL_0797 | pacS | CKL_0797 | CKL_2240 | Predicted Copper-binding protein. | PacS; Predicted cation-transporting ATPase. | 0.716 |
CKL_2138 | CKL_0797 | CKL_2138 | CKL_0797 | Pyruvate-flavodoxin oxidoreductase. | Predicted Copper-binding protein. | 0.403 |
CKL_2138 | CKL_3732 | CKL_2138 | CKL_3732 | Pyruvate-flavodoxin oxidoreductase. | Predicted transcriptional regulator. | 0.444 |
CKL_2138 | CKL_3755 | CKL_2138 | CKL_3755 | Pyruvate-flavodoxin oxidoreductase. | Predicted transcriptional regulator. | 0.444 |
CKL_2138 | CKL_3791 | CKL_2138 | CKL_3791 | Pyruvate-flavodoxin oxidoreductase. | Conserved hypothetical protein. | 0.403 |
CKL_2138 | actP | CKL_2138 | CKL_0796 | Pyruvate-flavodoxin oxidoreductase. | ActP; Predicted copper-transporting ATPase. | 0.619 |
CKL_2138 | pacS | CKL_2138 | CKL_2240 | Pyruvate-flavodoxin oxidoreductase. | PacS; Predicted cation-transporting ATPase. | 0.414 |
CKL_3732 | CKL_2138 | CKL_3732 | CKL_2138 | Predicted transcriptional regulator. | Pyruvate-flavodoxin oxidoreductase. | 0.444 |
CKL_3732 | actP | CKL_3732 | CKL_0796 | Predicted transcriptional regulator. | ActP; Predicted copper-transporting ATPase. | 0.468 |
CKL_3732 | pacS | CKL_3732 | CKL_2240 | Predicted transcriptional regulator. | PacS; Predicted cation-transporting ATPase. | 0.468 |
CKL_3755 | CKL_2138 | CKL_3755 | CKL_2138 | Predicted transcriptional regulator. | Pyruvate-flavodoxin oxidoreductase. | 0.444 |
CKL_3755 | actP | CKL_3755 | CKL_0796 | Predicted transcriptional regulator. | ActP; Predicted copper-transporting ATPase. | 0.451 |
CKL_3755 | pacS | CKL_3755 | CKL_2240 | Predicted transcriptional regulator. | PacS; Predicted cation-transporting ATPase. | 0.449 |
CKL_3791 | CKL_2138 | CKL_3791 | CKL_2138 | Conserved hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.403 |
page 1 of 2