Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKL_0936 | CKL_1516 | CKL_0936 | CKL_1516 | Predicted biotin synthesis protein. | Predicted transporter. | 0.921 |
CKL_0936 | CKL_2248 | CKL_0936 | CKL_2248 | Predicted biotin synthesis protein. | Conserved hypothetical protein. | 0.914 |
CKL_0936 | CKL_2497 | CKL_0936 | CKL_2497 | Predicted biotin synthesis protein. | Predicted ABC transporter, ATPase component. | 0.584 |
CKL_0936 | CKL_2498 | CKL_0936 | CKL_2498 | Predicted biotin synthesis protein. | Predicted permease. | 0.606 |
CKL_0936 | bioB1 | CKL_0936 | CKL_0937 | Predicted biotin synthesis protein. | BioB1; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.840 |
CKL_0936 | birA | CKL_0936 | CKL_2417 | Predicted biotin synthesis protein. | Bifunctional BirA-related protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.764 |
CKL_0936 | ecfA | CKL_0936 | CKL_0254 | Predicted biotin synthesis protein. | Predicted transporter protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.931 |
CKL_0936 | ecfA-2 | CKL_0936 | CKL_0255 | Predicted biotin synthesis protein. | Predicted transporter protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.927 |
CKL_0936 | ecfT | CKL_0936 | CKL_0256 | Predicted biotin synthesis protein. | Predicted transporter protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.951 |
CKL_1516 | CKL_0936 | CKL_1516 | CKL_0936 | Predicted transporter. | Predicted biotin synthesis protein. | 0.921 |
CKL_1516 | CKL_2248 | CKL_1516 | CKL_2248 | Predicted transporter. | Conserved hypothetical protein. | 0.921 |
CKL_1516 | CKL_2497 | CKL_1516 | CKL_2497 | Predicted transporter. | Predicted ABC transporter, ATPase component. | 0.748 |
CKL_1516 | ecfA | CKL_1516 | CKL_0254 | Predicted transporter. | Predicted transporter protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.947 |
CKL_1516 | ecfA-2 | CKL_1516 | CKL_0255 | Predicted transporter. | Predicted transporter protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.947 |
CKL_1516 | ecfT | CKL_1516 | CKL_0256 | Predicted transporter. | Predicted transporter protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.900 |
CKL_2248 | CKL_0936 | CKL_2248 | CKL_0936 | Conserved hypothetical protein. | Predicted biotin synthesis protein. | 0.914 |
CKL_2248 | CKL_1516 | CKL_2248 | CKL_1516 | Conserved hypothetical protein. | Predicted transporter. | 0.921 |
CKL_2248 | CKL_2249 | CKL_2248 | CKL_2249 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.687 |
CKL_2248 | CKL_2497 | CKL_2248 | CKL_2497 | Conserved hypothetical protein. | Predicted ABC transporter, ATPase component. | 0.635 |
CKL_2248 | CKL_2498 | CKL_2248 | CKL_2498 | Conserved hypothetical protein. | Predicted permease. | 0.606 |
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