Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKL_0117 | CKL_2257 | CKL_0117 | CKL_2257 | Conserved hypothetical protein. | Predicted Fe-only hydrogenase 1. | 0.621 |
CKL_0117 | hydE | CKL_0117 | CKL_0605 | Conserved hypothetical protein. | HydE; Hydrogenase maturation protein HydE. | 0.892 |
CKL_0117 | hydF | CKL_0117 | CKL_2330 | Conserved hypothetical protein. | HydF; Hydrogenase maturation protein HydF. | 0.895 |
CKL_0117 | hydG | CKL_0117 | CKL_3829 | Conserved hypothetical protein. | HydG; Hydrogenase maturation protein HydG. | 0.805 |
CKL_0320 | CKL_0838 | CKL_0320 | CKL_0838 | Conserved hypothetical protein containing a ferredoxin domain. | NADH dehydrogenase-related protein. | 0.778 |
CKL_0320 | CKL_2138 | CKL_0320 | CKL_2138 | Conserved hypothetical protein containing a ferredoxin domain. | Pyruvate-flavodoxin oxidoreductase. | 0.855 |
CKL_0320 | CKL_2257 | CKL_0320 | CKL_2257 | Conserved hypothetical protein containing a ferredoxin domain. | Predicted Fe-only hydrogenase 1. | 0.491 |
CKL_0320 | CKL_3023 | CKL_0320 | CKL_3023 | Conserved hypothetical protein containing a ferredoxin domain. | Conserved hypothetical protein. | 0.558 |
CKL_0320 | CKL_3337 | CKL_0320 | CKL_3337 | Conserved hypothetical protein containing a ferredoxin domain. | Automatic annotation. | 0.853 |
CKL_0428 | CKL_0838 | CKL_0428 | CKL_0838 | 2Fe-2S ferredoxin. | NADH dehydrogenase-related protein. | 0.944 |
CKL_0428 | CKL_2138 | CKL_0428 | CKL_2138 | 2Fe-2S ferredoxin. | Pyruvate-flavodoxin oxidoreductase. | 0.806 |
CKL_0428 | CKL_2257 | CKL_0428 | CKL_2257 | 2Fe-2S ferredoxin. | Predicted Fe-only hydrogenase 1. | 0.689 |
CKL_0428 | CKL_3023 | CKL_0428 | CKL_3023 | 2Fe-2S ferredoxin. | Conserved hypothetical protein. | 0.757 |
CKL_0428 | CKL_3337 | CKL_0428 | CKL_3337 | 2Fe-2S ferredoxin. | Automatic annotation. | 0.801 |
CKL_0838 | CKL_0320 | CKL_0838 | CKL_0320 | NADH dehydrogenase-related protein. | Conserved hypothetical protein containing a ferredoxin domain. | 0.778 |
CKL_0838 | CKL_0428 | CKL_0838 | CKL_0428 | NADH dehydrogenase-related protein. | 2Fe-2S ferredoxin. | 0.944 |
CKL_0838 | CKL_2138 | CKL_0838 | CKL_2138 | NADH dehydrogenase-related protein. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
CKL_0838 | CKL_2257 | CKL_0838 | CKL_2257 | NADH dehydrogenase-related protein. | Predicted Fe-only hydrogenase 1. | 0.986 |
CKL_0838 | CKL_3023 | CKL_0838 | CKL_3023 | NADH dehydrogenase-related protein. | Conserved hypothetical protein. | 0.974 |
CKL_0838 | CKL_3337 | CKL_0838 | CKL_3337 | NADH dehydrogenase-related protein. | Automatic annotation. | 0.905 |
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