STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_08921FYVE domain-containing protein. (304 aa)    
Predicted Functional Partners:
IF1G_06156
Siderophore biosynthesis protein.
     
 0.817
IF1G_10330
Ras-related protein Rab7.
     
 0.760
IF1G_06777
Small GTP-binding protein YPTI.
     
 0.739
IF1G_10721
GTP-binding protein GTR1.
    
 
 0.738
IF1G_02920
Nuclear control of ATPase protein.
    
 0.725
IF1G_00675
RAB/GTPase protein.
    
 0.725
IF1G_06730
Rho-associated protein kinase.
    
 0.708
IF1G_06006
Extracellular serine-rich protein.
    
 0.708
IF1G_02049
Vacuolar membrane protein.
    
 0.708
IF1G_02202
Serine-threonine rich protein.
    
 0.708
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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