STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_00088HbrB-like protein. (881 aa)    
Predicted Functional Partners:
IF1G_00090
Vacuolar morphogenesis protein AvaB.
 
      0.899
IF1G_03099
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.890
IF1G_09450
Cytosolic regulator Pianissimo.
    
 0.804
IF1G_08183
WD-repeat protein pop3.
    
 0.779
IF1G_00279
Stress-activated map kinase-interacting protein.
    
 0.779
IF1G_00083
Fructose-2,6-bisphosphatase.
 
    
 0.648
IF1G_08218
Ankyrin repeat containing protein.
    
 
 0.634
IF1G_09835
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.618
IF1G_02219
Pre-rRNA processing protein Tsr1.
   
  0.610
IF1G_00779
Bystin.
   
  0.607
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.