STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_00540Ankyrin repeat and BTB/POZ domain-containing protein 1. (497 aa)    
Predicted Functional Partners:
IF1G_02018
SCF ubiquitin ligase subunit CulC; Belongs to the cullin family.
   
 0.744
IF1G_02967
Cullin-1; Belongs to the cullin family.
   
 0.633
IF1G_07631
Phosphatidyl synthase.
   
 0.576
IF1G_05501
Proteasome subunit alpha type 3; Belongs to the EF-1-beta/EF-1-delta family.
    
   0.550
IF1G_00899
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.549
IF1G_06805
Rho GTPase activator Rga.
    
 0.539
IF1G_05437
Cysteinyl-tRNA synthetase.
    
   0.533
IF1G_04599
Valyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.533
IF1G_00461
Skp1 family protein; Belongs to the SKP1 family.
    
 0.530
IF1G_01340
Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation; Belongs to the adenylate kinase family. AK6 subfamily.
   
  0.508
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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