STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASEFRAS and EF-hand domain containing. (740 aa)    
Predicted Functional Partners:
TTC9
Tetratricopeptide repeat domain 9.
   
  
 0.618
ENSBBBP00000000976
annotation not available
      
 0.613
ENSBBBP00000014882
annotation not available
    
 
 0.597
TMEM65
Transmembrane protein 65.
      
 0.539
ENSBBBP00000015488
annotation not available
     
 0.537
ENSBBBP00000005044
annotation not available
    
 0.529
BICDL1
BICD family like cargo adaptor 1.
    
 
 0.529
RAB3IL1
RAB3A interacting protein like 1.
    
 0.529
ZSWIM4
Zinc finger SWIM-type containing 4.
      
 0.526
DNAJB13
DnaJ heat shock protein family (Hsp40) member B13.
      
 0.515
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.