STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0507Glycoside hydrolase family 43; Distantly related to beta-glycosidases; Belongs to the glycosyl hydrolase 43 family. (333 aa)    
Predicted Functional Partners:
BVU_0508
Glycoside hydrolase family 43, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.878
BVU_1871
Conserved hypothetical protein.
   
 0.714
BVU_0497
Glycoside hydrolase family 43; Modular protein with N-terminal domain distantly related to beta-glycosidases and C-terminal related to beta-xylosidases/alpha-L-arabinofuranosidases.
 
   
 0.683
BVU_0851
Putative TonB-linked outer membrane receptor.
  
     0.668
BVU_0850
Conserved hypothetical protein.
  
     0.638
BVU_0509
Glycoside hydrolase family 43; Modular protein with N-terminal domain related to beta-xylosidases/arabinofuranosidases and C-terminal domain related to beta-glycosidases.
 
     0.563
BVU_0843
Glycoside hydrolase family 5, candidate beta-glycosidase.
 
  
 0.530
BVU_1125
Hypothetical protein.
  
     0.523
BVU_1004
Glycoside hydrolase family 97; Related to alpha-glucosidases.
 
     0.518
BVU_0514
Conserved hypothetical protein.
  
     0.513
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.