Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_0163 | BVU_0182 | Conserved hypothetical protein. | Carbohydrate esterase family 12; Related to pectin acetylesterases. | 0.804 |
BVU_0163 | BVU_0515 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.614 |
BVU_0163 | BVU_1781 | Conserved hypothetical protein. | Putative outer membrane protein, probably involved in nutrient binding. | 0.522 |
BVU_0163 | BVU_1782 | Conserved hypothetical protein. | Putative outer membrane protein, probably involved in nutrient binding. | 0.581 |
BVU_0163 | BVU_1783 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.611 |
BVU_0163 | BVU_1790 | Conserved hypothetical protein. | Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases. | 0.683 |
BVU_0182 | BVU_0163 | Carbohydrate esterase family 12; Related to pectin acetylesterases. | Conserved hypothetical protein. | 0.804 |
BVU_0182 | BVU_0508 | Carbohydrate esterase family 12; Related to pectin acetylesterases. | Glycoside hydrolase family 43, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 43 family. | 0.441 |
BVU_0182 | BVU_0515 | Carbohydrate esterase family 12; Related to pectin acetylesterases. | Conserved hypothetical protein. | 0.636 |
BVU_0182 | BVU_1783 | Carbohydrate esterase family 12; Related to pectin acetylesterases. | Conserved hypothetical protein. | 0.625 |
BVU_0182 | BVU_1790 | Carbohydrate esterase family 12; Related to pectin acetylesterases. | Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases. | 0.720 |
BVU_0508 | BVU_0182 | Glycoside hydrolase family 43, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 43 family. | Carbohydrate esterase family 12; Related to pectin acetylesterases. | 0.441 |
BVU_0508 | BVU_0515 | Glycoside hydrolase family 43, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 43 family. | Conserved hypothetical protein. | 0.568 |
BVU_0508 | BVU_1783 | Glycoside hydrolase family 43, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 43 family. | Conserved hypothetical protein. | 0.610 |
BVU_0508 | BVU_1790 | Glycoside hydrolase family 43, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 43 family. | Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases. | 0.445 |
BVU_0515 | BVU_0163 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.614 |
BVU_0515 | BVU_0182 | Conserved hypothetical protein. | Carbohydrate esterase family 12; Related to pectin acetylesterases. | 0.636 |
BVU_0515 | BVU_0508 | Conserved hypothetical protein. | Glycoside hydrolase family 43, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 43 family. | 0.568 |
BVU_0515 | BVU_1783 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.817 |
BVU_0515 | BVU_1784 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.422 |
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