Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_3359 | BVU_3365 | Transposase. | Putative mobilization protein. | 0.772 |
BVU_3359 | BVU_3377 | Transposase. | Conserved hypothetical protein. | 0.773 |
BVU_3359 | BVU_3380 | Transposase. | Conserved protein found in conjugate transposon TraM. | 0.769 |
BVU_3359 | BVU_3381 | Transposase. | Conserved hypothetical protein found in conjugate transposon TraN. | 0.759 |
BVU_3359 | BVU_3383 | Transposase. | Putative mobilization protein. | 0.767 |
BVU_3359 | BVU_3384 | Transposase. | Conserved hypothetical protein. | 0.765 |
BVU_3359 | BVU_3389 | Transposase. | Putative DNA mismatch repair protein mutS. | 0.761 |
BVU_3359 | BVU_3393 | Transposase. | Putative DNA topoisomerase I. | 0.783 |
BVU_3359 | BVU_3430 | Transposase. | DNA primase. | 0.773 |
BVU_3365 | BVU_3359 | Putative mobilization protein. | Transposase. | 0.772 |
BVU_3365 | BVU_3377 | Putative mobilization protein. | Conserved hypothetical protein. | 0.780 |
BVU_3365 | BVU_3380 | Putative mobilization protein. | Conserved protein found in conjugate transposon TraM. | 0.778 |
BVU_3365 | BVU_3381 | Putative mobilization protein. | Conserved hypothetical protein found in conjugate transposon TraN. | 0.787 |
BVU_3365 | BVU_3383 | Putative mobilization protein. | Putative mobilization protein. | 0.778 |
BVU_3365 | BVU_3384 | Putative mobilization protein. | Conserved hypothetical protein. | 0.752 |
BVU_3365 | BVU_3389 | Putative mobilization protein. | Putative DNA mismatch repair protein mutS. | 0.791 |
BVU_3365 | BVU_3393 | Putative mobilization protein. | Putative DNA topoisomerase I. | 0.802 |
BVU_3365 | BVU_3430 | Putative mobilization protein. | DNA primase. | 0.762 |
BVU_3377 | BVU_3359 | Conserved hypothetical protein. | Transposase. | 0.773 |
BVU_3377 | BVU_3365 | Conserved hypothetical protein. | Putative mobilization protein. | 0.780 |
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