STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3895Glutamate decarboxylase; Belongs to the group II decarboxylase family. (482 aa)    
Predicted Functional Partners:
glsA-2
Putative glutaminase; Belongs to the glutaminase family.
 
 
 0.979
BVU_4007
Glutamate synthase, large subunit.
    
 0.953
glsA
Glutaminase; Belongs to the glutaminase family.
  
 
 0.946
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.945
BVU_3604
Putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.935
BVU_3530
Glutamine synthetase I.
  
 
 0.920
BVU_0246
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.915
BVU_0251
NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.915
panD
Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.908
BVU_3579
Glutamine synthetase.
     
  0.900
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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