STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166QCA0Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
A0A166JV37
Uncharacterized protein.
    
 0.886
A0A166Q581
Uncharacterized protein.
    
 0.886
A0A166KME6
TFIID_20kDa domain-containing protein.
    
 0.757
A0A166W4X7
TAF-domain-containing protein.
    
  0.757
A0A166CAI6
TFIID-18kDa-domain-containing protein.
    
 0.745
A0A166VSA2
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.743
A0A166PYU3
WD40 repeat-like protein.
    
  0.741
A0A166PYJ4
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.736
A0A166WCC7
SGF29 C-terminal domain-containing protein.
    
 0.732
A0A166CM88
Uncharacterized protein.
    
 0.731
Your Current Organism:
Fibularhizoctonia sp. CBS109695
NCBI taxonomy Id: 436010
Other names: F. sp. CBS 109695, Fibularhizoctonia sp. CBS 109695, Fibulorhizoctonia sp. CBS 109695
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