Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSTLU_12516 | OSTLU_17346 | A4RX02 | A4S4R7 | TP6A_N domain-containing protein. | Uncharacterized protein; Belongs to the RecA family. | 0.482 |
OSTLU_12516 | OSTLU_17626 | A4RX02 | A4S5S4 | TP6A_N domain-containing protein. | RECA_2 domain-containing protein. | 0.482 |
OSTLU_12516 | OSTLU_28736 | A4RX02 | A4RQP6 | TP6A_N domain-containing protein. | Uncharacterized protein. | 0.459 |
OSTLU_12516 | OSTLU_33041 | A4RX02 | A4S1B6 | TP6A_N domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.519 |
OSTLU_12516 | OSTLU_35514 | A4RX02 | A4S0J4 | TP6A_N domain-containing protein. | Uncharacterized protein. | 0.464 |
OSTLU_12516 | OSTLU_35638 | A4RX02 | A4S0F9 | TP6A_N domain-containing protein. | Uncharacterized protein. | 0.677 |
OSTLU_12516 | OSTLU_43144 | A4RX02 | A4S7V9 | TP6A_N domain-containing protein. | Mre11_DNA_bind domain-containing protein. | 0.552 |
OSTLU_12516 | OSTLU_86836 | A4RX02 | A4RV28 | TP6A_N domain-containing protein. | RECA_2 domain-containing protein. | 0.521 |
OSTLU_12516 | OSTLU_92534 | A4RX02 | A4RVC2 | TP6A_N domain-containing protein. | ERCC4 domain-containing protein. | 0.553 |
OSTLU_12516 | TOP6B | A4RX02 | A4RXP1 | TP6A_N domain-containing protein. | DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. | 0.938 |
OSTLU_17346 | OSTLU_12516 | A4S4R7 | A4RX02 | Uncharacterized protein; Belongs to the RecA family. | TP6A_N domain-containing protein. | 0.482 |
OSTLU_17346 | OSTLU_28736 | A4S4R7 | A4RQP6 | Uncharacterized protein; Belongs to the RecA family. | Uncharacterized protein. | 0.730 |
OSTLU_17346 | OSTLU_33041 | A4S4R7 | A4S1B6 | Uncharacterized protein; Belongs to the RecA family. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.734 |
OSTLU_17346 | OSTLU_35638 | A4S4R7 | A4S0F9 | Uncharacterized protein; Belongs to the RecA family. | Uncharacterized protein. | 0.880 |
OSTLU_17346 | OSTLU_43144 | A4S4R7 | A4S7V9 | Uncharacterized protein; Belongs to the RecA family. | Mre11_DNA_bind domain-containing protein. | 0.757 |
OSTLU_17346 | OSTLU_86836 | A4S4R7 | A4RV28 | Uncharacterized protein; Belongs to the RecA family. | RECA_2 domain-containing protein. | 0.943 |
OSTLU_17346 | OSTLU_92534 | A4S4R7 | A4RVC2 | Uncharacterized protein; Belongs to the RecA family. | ERCC4 domain-containing protein. | 0.665 |
OSTLU_17626 | OSTLU_12516 | A4S5S4 | A4RX02 | RECA_2 domain-containing protein. | TP6A_N domain-containing protein. | 0.482 |
OSTLU_17626 | OSTLU_28736 | A4S5S4 | A4RQP6 | RECA_2 domain-containing protein. | Uncharacterized protein. | 0.778 |
OSTLU_17626 | OSTLU_33041 | A4S5S4 | A4S1B6 | RECA_2 domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.744 |
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