STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSTLU_31651UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (190 aa)    
Predicted Functional Partners:
OSTLU_44236
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.992
OSTLU_36151
Uncharacterized protein.
    
 0.991
OSTLU_39911
TPR_REGION domain-containing protein.
    
 0.988
OSTLU_45844
APC1_C domain-containing protein.
    
 0.987
OSTLU_41270
ANAPC5 domain-containing protein.
    
 0.987
OSTLU_6074
DOC domain-containing protein.
   
 0.985
OSTLU_7340
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
0.984
OSTLU_9831
RING-type domain-containing protein.
   
 0.958
OSTLU_39499
HECT domain-containing protein.
    
 0.929
OSTLU_42733
Uncharacterized protein.
    
 0.916
Your Current Organism:
Ostreococcus lucimarinus
NCBI taxonomy Id: 436017
Other names: O. lucimarinus CCE9901, Ostreococcus lucimarinus CCE9901
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