STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSTLU_38691UBIQUITIN_CONJUGAT_2 domain-containing protein. (152 aa)    
Predicted Functional Partners:
OSTLU_39499
HECT domain-containing protein.
   
 0.992
OSTLU_26731
Uncharacterized protein.
    
 0.983
RPL40
Ribosomal protein L40, component of cytosolic 80S ribosome and 60S large subunit.
   
 0.895
OSTLU_34833
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.895
OSTLU_35452
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.886
RPS27a
Ribosomal protein S27a, component of cytosolic 80S ribosome and 40S small subunit.
   
 0.868
OSTLU_9831
RING-type domain-containing protein.
    
 0.849
Rbx1
RING-box protein 1.
   
 0.817
OSTLU_30255
Pex2_Pex12 domain-containing protein.
    
 0.766
OSTLU_92878
Uncharacterized protein.
   
 0.761
Your Current Organism:
Ostreococcus lucimarinus
NCBI taxonomy Id: 436017
Other names: O. lucimarinus CCE9901, Ostreococcus lucimarinus CCE9901
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