node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACD65951.1 | rplA | SYO3AOP1_0306 | SYO3AOP1_0301 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.967 |
ACD65951.1 | rplJ | SYO3AOP1_0306 | SYO3AOP1_0300 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.964 |
ACD65951.1 | rplK | SYO3AOP1_0306 | SYO3AOP1_0302 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.968 |
ACD65951.1 | rplO | SYO3AOP1_0306 | SYO3AOP1_0272 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.949 |
ACD65951.1 | rpmG | SYO3AOP1_0306 | SYO3AOP1_0305 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | PFAM: ribosomal protein L33; KEGG: aae:aq_1930a 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.984 |
ACD65951.1 | rpmJ | SYO3AOP1_0306 | SYO3AOP1_0267 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | PFAM: ribosomal protein L36; KEGG: gvi:gsl3575 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.949 |
ACD65951.1 | rpsE | SYO3AOP1_0306 | SYO3AOP1_0274 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.949 |
ACD65951.1 | rpsJ | SYO3AOP1_0306 | SYO3AOP1_0292 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.960 |
ACD65951.1 | rpsK | SYO3AOP1_0306 | SYO3AOP1_0265 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.949 |
ACD65951.1 | tsf | SYO3AOP1_0306 | SYO3AOP1_0576 | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.973 |
rplA | ACD65951.1 | SYO3AOP1_0301 | SYO3AOP1_0306 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aae:aq_005 elongation factor EF-Tu. | 0.967 |
rplA | rplJ | SYO3AOP1_0301 | SYO3AOP1_0300 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rplA | rplK | SYO3AOP1_0301 | SYO3AOP1_0302 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplO | SYO3AOP1_0301 | SYO3AOP1_0272 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.994 |
rplA | rpmG | SYO3AOP1_0301 | SYO3AOP1_0305 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L33; KEGG: aae:aq_1930a 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.988 |
rplA | rpmJ | SYO3AOP1_0301 | SYO3AOP1_0267 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L36; KEGG: gvi:gsl3575 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.988 |
rplA | rpsE | SYO3AOP1_0301 | SYO3AOP1_0274 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.990 |
rplA | rpsJ | SYO3AOP1_0301 | SYO3AOP1_0292 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.990 |
rplA | rpsK | SYO3AOP1_0301 | SYO3AOP1_0265 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.989 |
rplA | tsf | SYO3AOP1_0301 | SYO3AOP1_0576 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.926 |