STRINGSTRING
Nmar_0074 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0074" - PFAM: PEBP family protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0074PFAM- PEBP family protein; KEGG- hma-rrnAC0854 phosphatidylethanolamine-binding protein (149 aa)    
Predicted Functional Partners:
Nmar_0072
PFAM- protein synthesis factor GTP-binding; Initiation factor eIF2 gamma domain protein; KEGG- afu-AF0592 translation initiation factor eIF-2 gamma subunit (420 aa)
   
        0.743
Nmar_0073
KEGG- mja-MJ1320 hypothetical protein (122 aa)
              0.726
rpl15
50S ribosomal protein L15; Binds to the 23S rRNA (154 aa)
     
      0.697
Nmar_0425
PFAM- ribosomal protein S9; KEGG- mth-MTH39 30S ribosomal protein S9/L13; Belongs to the universal ribosomal protein uS9 family (149 aa)
     
 
  0.694
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (331 aa)
     
 
  0.675
rps2
PFAM- ribosomal protein S2; KEGG- tpe-Tpen_0274 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family (207 aa)
     
      0.669
rps6e
PFAM- Ribosomal protein S6e; KEGG- hwa-HQ1070A ribosomal protein S6.eR; Belongs to the eukaryotic ribosomal protein eS6 family (137 aa)
   
        0.662
Nmar_0449
PFAM- ribosomal protein L16; KEGG- hbu-Hbut_1653 50S ribosomal protein L10e (169 aa)
     
      0.646
rpl13
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (154 aa)
   
 
  0.643
Nmar_0399
TIGRFAM- ribosomal protein S5; PFAM- ribosomal protein S5 domain protein; Ribosomal protein S5; KEGG- tpe-Tpen_0236 ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family (238 aa)
     
 
  0.641
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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